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Cannot Match Namelist Object Name Scee

Added new DBEGINREPGEOMGROUP display command token to mark the beginning of the geometry associated with a representation. USAGE load_mtz filename [, prefix [, amplitudes, phases [, weights [, reso_low [, reso_high ]]]]] ARGUMENTS filename = str: filename prefix = str: object name or prefix {default: filename without extension} If "carve= not provided, then the whole brick is displayed. The issue in mentioned in comment 4 is not fixed! Check This Out

Updated all of the old text command source files to better describe their function, and made sure they had appropriate auto-generated CVS header tags. If not provided, and dragging is active, then dragging is instead deactivated. Added new "stage size" command to let the user control how large the projected stage floor and wall planes are. FLTK provides this functionality for itself in the most recent versions, but we use our own implementation so that VMD can be compiled on older versions. https://gcc.gnu.org/bugzilla/show_bug.cgi?id=52512

autopsf: cranked version number autopsf: Remove ability to use -nofailedguess namdenergey: Fix behavior of ts and stride arguments. Bug36582 - Namelist I/O error: Bogus "Cannot match namelist object" Summary: Namelist I/O error: Bogus "Cannot match namelist object" Status: RESOLVED FIXED Alias: None Product: gcc Classification: Unclassified Component: fortran (show Disable event flushing workaround for the MacOS X x86 builds based on the most recent FLTK/Tcl/Tk versions Updated comments about FLTK OpenGL window creation flags and their behavior on MacOS X state = the state into which the object should be loaded (default=1) (set state=0 to append new surface as a new state) carve = a radius about each atom in the

USAGE alter_state state, selection, expression EXAMPLES alter_state 1, all, x=x+5 rebuild NOTES By default, most of the symbols from "alter" are available for use on a read-only basis. This change is currently on a trial basis. Enabled the use of rt_tristripscnv3fv() for rendering of triangle strips, using the very latest version of Tachyon. Added comments to timestep regarding assumed time/energy/force units, though different programs may use different units Increased force arrow scaling constant by a factor of 3 vs.

docs: a few corrections in the documentation for measure cluster. Ensure that the background mode flag (solid, or gradient background) gets copied when FileRenderer subclasses are constructed from the active display device state. Regards, Frank On Sat, 2008-06-21 at 08:32 +0000, burnus at gcc dot gnu dot org wrote: > > ------- Comment #6 from burnus at gcc dot gnu dot org 2008-06-21 08:32 http://stackoverflow.com/questions/27830652/fortran-runtime-error-cannot-match-namelist chirality: Fixed typo in variable name that was leading to incorrect flagging of moved hydrogen atoms, preventing chiral error from being fixed.

for the next 4.3.x version), though exceptions are made for serious bugs especially if the fix is algorithmically simple. (Otherwise not as by fixing one thing, one might create another bug Since Maya will not handle objects that belong to more than one group, we use representation level groupings only and don't generate "g" tokens consisting of both molecule and representation strings. This command not yet fully supported. Anyway, it's fixed now.

The rms values are returned as a python array. https://books.google.com/books?id=WQcAAAAAMBAJ&pg=PA2&lpg=PA2&dq=cannot+match+namelist+object+name+scene&source=bl&ots=28ZdkCH4o_&sig=DhkPRpSd9zOOqUoRboUY9FDXmt8&hl=en&sa=X&ved=0ahUKEwju1tO98_fPAhUEuRoKHer_D40Q6AEIRzAF Fix a minor nit in the expose/redraw behavior for the "show preview" checkbox in the Graph tab of the Labels window. It is not typical in the sense that the last several namelist bugs involved parsing and whitespace issues. USAGE log_open filename SEE ALSO log, log_closeapi: pymol.commanding.log_openlsDESCRIPTION List contents of the current working directory.

Implemented new FileRenderer line_array() and polyline_array() primitives to enable much more efficient scene export for formats that support various types of line array geometry nodes. his comment is here The RMSD of the aligned atoms (after outlier rejection!) is reported in the text output. Improved floating point consistency by using expf() and powf() in a few spots in the orbital code. USAGE drag [ selection ] ARGUMENTS selection = string: atoms to drag.

viewchangerender: Modified the way that VCR affects the duration in Movie Maker and fixed the recalculation of total duration after the order in the movie list is changed. replaced some FP divide with multiplies in the FileRenderer code. Changed the width of the main VMD window so that compilations against FLTK version 1.3.x using antialiased fonts will not have the help menu running off of the right hand edge http://ecoflashapps.com/cannot-match/cannot-match-namelist-object-name-cutres.html A different way to handle Microsoft Exchange emails more hot questions question feed about us tour help blog chat data legal privacy policy work here advertising info mobile contact us feedback

If an empty string, then no properties get loaded. {default: use load_atom_props_default setting} EXAMPLES load 1dn2.pdb load file001.pdb, ligand load http://delsci.com/sample.pdb load file002.mae, ligand, object_props=* NOTES The file extension is used If any of the 3-D printing tools encounter difficulties with the small coordinate magnitudes, one can always set the viewing matrices to the identity matrix prior to export. add support for building full topology files through topotools.

Added basic implementation of text export for VRML2/VRML97, and X3D scene exports.

If I receive written permission to use content from a paper without citing, is it plagiarism? Misc cleanup. To not make any confusion if it is indeed different, I created a new bug. USAGE ending PYMOL API cmd.ending()api: pymol.moving.endingexport_dotsDESCRIPTION "export_dots" is an old unsupported command that may have something to do with returning the coordinates of the dot representation back to the Python layer.api:

MAFFT was using a different descriptor for the sequence name that clustalw. Added documentation for Python IMD copyunitcell feature Applied Axel's patch to allow forcible selection of which CUDA device to use for ILS. SEE ALSO runapi: pymol.parsing.spawnforwardDESCRIPTION "forward" moves the movie one frame forward. navigate here USAGE center [ selection [, state [, origin [, animate ]]]] EXAMPLES center chain B center 145/ ARGUMENTS selection = string: selection-expression or name pattern (default: "all").

I've tried some basic ideas-messing around with the input variables, setting NProjection to 0, but I can't figure out what is going wrong. used some predefined 'const' vars instead of hardcoding magic numbers cranked version VMD 1.9a30 (Feb 10, 2011) Compensate for extra unit of Z translation resulting from moving the coordinate system handedness Added: branches/gcc-4_8-branch/gcc/testsuite/gfortran.dg/namelist_79.f90 Modified: branches/gcc-4_8-branch/gcc/testsuite/ChangeLog branches/gcc-4_8-branch/libgfortran/ChangeLog branches/gcc-4_8-branch/libgfortran/io/list_read.c Comment 9 Jerry DeLisle 2013-04-28 16:54:14 UTC Really closed now. USAGE create name, selection [,source_state [,target_state ] ] ARGUMENTS name = string: name of object to create or modify selection = string: atoms to include in the new object source_state =

USAGE copy target, source [, zoom ] NOTES Currently, this command only works for molecular objects.